chromDist: chromDist

Description Usage Arguments

View source: R/chromDist.R

Description

Plot genome-wide snv distribution

Usage

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chromDist(..., snv_data = NULL, notch = FALSE, write = FALSE,
  binsize = 0.1, density = TRUE)

Arguments

snv_data

A dataframe of snvs [Default: NULL]

notch

Filter in/out Notch region [Default: FALSE]

write

Write plot to file 'plots/snv_dist_genome_by.png'? [Default: FALSE]

binsize

Control the density adjustment if density=TRUE, or the binwidth if density=FALSE. For histograms a value of 0.1 corresponds to 1/10th of a Mb [Default:0.1]

density

Plot as density? [Default: TRUE]


nriddiford/mutationProfiles documentation built on Nov. 8, 2019, 6:22 p.m.