nriddiford/mutationProfiles
Collection of functions to explore SNV data (e.g. Mutect2/Freebayes) parsed by get_tris.pl

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dist2motif2: dist2Motif2 Calculate the distance from each breakpoint to...

dist2motif2: dist2Motif2 Calculate the distance from each breakpoint to...
In nriddiford/mutationProfiles: Collection of functions to explore SNV data (e.g. Mutect2/Freebayes) parsed by get_tris.pl

Description Usage

View source: R/dist2motif.R

Description

dist2Motif2 Calculate the distance from each breakpoint to closest motif in a directory of files

Usage

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dist2motif2(..., breakpoints = NA, feature_file = NA,
  featureDir = "~/Desktop/script_test/svBreaks/rawdata/features/",
  sim = FALSE, keep = NULL, position = "centre")

nriddiford/mutationProfiles documentation built on Nov. 7, 2021, 12:14 a.m.

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