mutSigs: mutSigs

In nriddiford/mutationProfiles: Collection of functions to explore SNV data (e.g. Mutect2/Freebayes) parsed by get_tris.pl

Description

Calculate and plot the mutational signatures accross samples using the package 'deconstructSigs'

Usage

mutSigs(..., snv_data = NULL, by_sample = FALSE, pie = FALSE,
  write = FALSE)

Arguments

pie	Plot a pie chart shwoing contribution of each signature to overall profile [Default no]
samples	Calculates and plots mutational signatures on a per-sample basis [Default no]

nriddiford/mutationProfiles documentation built on Nov. 7, 2021, 12:14 a.m.