UnexpandedLFs.fn: Creates a matrix of length or age composition data WITHOUT...

In nwfsc-assess/nwfscSurvey: Northwest Fisheries Science Center Survey

Creates a matrix of length or age composition data WITHOUT expantion Written by Chantel Wetzel to work with the data warehouse data formatting,

Description

Creates a matrix of length or age composition data WITHOUT expantion Written by Chantel Wetzel to work with the data warehouse data formatting,

Usage

UnexpandedLFs.fn(
  dir = NULL,
  datL,
  lgthBins = 1,
  sex = 3,
  partition = 0,
  fleet = "Enter Fleet",
  ageErr = "NA",
  agelow = -1,
  agehigh = -1,
  month = "Enter Month",
  printfolder = "forSS",
  verbose = TRUE
)

Arguments

dir	directory this is where the output files will be saved
datL	the read in length comps by the PullBio.fn function
lgthBins	length bins
sex	(0 = unsexed, 1 = females, 2 = males, 3 = females then males) sex value for Stock Synthesis
partition	partition for Stock Synthesis
fleet	fleet number
ageErr	Number of ageing error matrix for SS
agelow	age bin for SS (default value of -1)
agehigh	age bin for SS (default value of -1)
month	month the samples were collected
printfolder	folder where the length comps will be saved
verbose	A logical that specifies if you want to print messages and warnings to the console. The default is TRUE.

Author(s)

Chantel Wetzel

nwfsc-assess/nwfscSurvey documentation built on May 5, 2024, 5:21 a.m.