getNcbiGeneTransPep: Feeding BED: Download NCBI gene DATA and load gene,...
In patzaw/BED: Biological Entity Dictionary (BED)
View source: R/getNcbiGeneTransPep.R
getNcbiGeneTransPep R Documentation
Feeding BED: Download NCBI gene DATA and load gene, transcript and peptide
information in BED
Description
Not exported to avoid unintended modifications of the DB.
Usage
getNcbiGeneTransPep(organism, reDumpThr = 1e+05, ddir, curDate)
Arguments
organism
character vector of 1 element corresponding to the organism
of interest (e.g. "Homo sapiens")
reDumpThr
time difference threshold between 2 downloads
ddir
path to the directory where the data should be saved
curDate
current date as given by Sys.Date
patzaw/BED documentation built on April 30, 2024, 5:31 a.m.
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View source: R/getNcbiGeneTransPep.R
| getNcbiGeneTransPep | R Documentation |
Feeding BED: Download NCBI gene DATA and load gene, transcript and peptide information in BED
Description
Not exported to avoid unintended modifications of the DB.
Usage
getNcbiGeneTransPep(organism, reDumpThr = 1e+05, ddir, curDate)
Arguments
organism |
character vector of 1 element corresponding to the organism of interest (e.g. "Homo sapiens") |
reDumpThr |
time difference threshold between 2 downloads |
ddir |
path to the directory where the data should be saved |
curDate |
current date as given by Sys.Date |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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