getOrgNames: Get organism names from taxonomy IDs

In patzaw/BED: Biological Entity Dictionary (BED)

Get organism names from taxonomy IDs

Description

Get organism names from taxonomy IDs

Usage

getOrgNames(taxID = NULL)

Arguments

taxID

a vector of taxonomy IDs. If NULL (default) the function lists all taxonomy IDs available in the DB.

Value

A data.frame mapping taxonomy IDs to organism names with the following fields:

• taxID: the taxonomy ID

• name: the organism name

• nameClass: the class of the name

See Also

getTaxId, listOrganisms

Examples

## Not run: 
getOrgNames(c("9606", "10090"))
getOrgNames("9606")

## End(Not run)

patzaw/BED documentation built on April 30, 2024, 5:31 a.m.