getUniprot: Feeding BED: Download Uniprot information in BED

View source: R/getUniprot.R

getUniprotR Documentation

Feeding BED: Download Uniprot information in BED

Description

Not exported to avoid unintended modifications of the DB.

Usage

getUniprot(organism, taxDiv, release, ddir)

Arguments

organism

character vector of 1 element corresponding to the organism of interest (e.g. "Homo sapiens")

taxDiv

the taxonomic division to which the organism belong (e.g., "human", "rodents", "mammals", "vertebrates")

release

the release of interest (check if already downloaded)

ddir

path to the directory where the data should be saved


patzaw/BED documentation built on April 30, 2024, 5:31 a.m.