compute_var_M.BM: Computation of the variance.
In pbastide/PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM
compute_var_M.BM R Documentation
Computation of the variance.
Description
compute_var_M.BM finds the variance that is the maximum of likelihood
Usage
compute_var_M.BM(phylo, var_diff, diff_exp, edges_max, random.root, mu)
Arguments
phylo
Tree
var_diff
variances of differences result of function compute_var_diff.BM
diff_exp
differences of expectations result of function compute_diff_exp.BM
edges_max
Edges where the shifts occur result of function segmentation.BM
Details
Given the variances, the costs0 and the edges where the shifts occurs, the
computation of the maximum of likelihood in the variance is simple.
Value
a p x p matrix : the computed variance
pbastide/PhylogeneticEM documentation built on Feb. 12, 2024, 1:27 a.m.
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| compute_var_M.BM | R Documentation |
Computation of the variance.
Description
compute_var_M.BM finds the variance that is the maximum of likelihood
Usage
compute_var_M.BM(phylo, var_diff, diff_exp, edges_max, random.root, mu)
Arguments
phylo |
Tree |
var_diff |
variances of differences result of function |
diff_exp |
differences of expectations result of function |
edges_max |
Edges where the shifts occur result of function |
Details
Given the variances, the costs0 and the edges where the shifts occurs, the computation of the maximum of likelihood in the variance is simple.
Value
a p x p matrix : the computed variance
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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