compute_variance_covariance.scOU: Complete variance covariance matrix for scOU
In pbastide/PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM
compute_variance_covariance.scOU R Documentation
Complete variance covariance matrix for scOU
Description
compute_variance_covariance.scOU computes the (n+m)*p squared variance covariance
matrix of vec(X).
Usage
compute_variance_covariance.scOU(
times_shared,
distances_phylo,
params_old,
...
)
Arguments
times_shared
times of shared ancestry of all nodes and tips, result of function
compute_times_ca
distances_phylo
(matrix) : phylogenetic distance, result of function
compute_dist_phy
params_old
(list) : old parameters to be used in the E step
Value
matrix of variance covariance for the scOU
pbastide/PhylogeneticEM documentation built on Feb. 12, 2024, 1:27 a.m.
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| compute_variance_covariance.scOU | R Documentation |
Complete variance covariance matrix for scOU
Description
compute_variance_covariance.scOU computes the (n+m)*p squared variance covariance
matrix of vec(X).
Usage
compute_variance_covariance.scOU(
times_shared,
distances_phylo,
params_old,
...
)
Arguments
times_shared |
times of shared ancestry of all nodes and tips, result of function
|
distances_phylo |
(matrix) : phylogenetic distance, result of function
|
params_old |
(list) : old parameters to be used in the E step |
Value
matrix of variance covariance for the scOU
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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