compute_shifts_from_betas: Computation of shifts from the vector of optimal values
In pbastide/PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM
View source: R/shifts_manipulations.R
compute_shifts_from_betas R Documentation
Computation of shifts from the vector of optimal values
Description
compute_shifts_from_betas computes the list of shifts corresponding
to the vector of optimal values on nodes.
Usage
compute_shifts_from_betas(phylo, betas)
Arguments
phylo
a phylogenetic tree, class phylo.
betas
vector of size (ntaxa + Nnode) of the optimal values at each
node and tip.
Details
This function uses function fun on each row of matrix of edges.
Value
vector of shifts.
pbastide/PhylogeneticEM documentation built on Feb. 12, 2024, 1:27 a.m.
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View source: R/shifts_manipulations.R
| compute_shifts_from_betas | R Documentation |
Computation of shifts from the vector of optimal values
Description
compute_shifts_from_betas computes the list of shifts corresponding
to the vector of optimal values on nodes.
Usage
compute_shifts_from_betas(phylo, betas)
Arguments
phylo |
a phylogenetic tree, class |
betas |
vector of size (ntaxa + Nnode) of the optimal values at each node and tip. |
Details
This function uses function fun on each row of matrix of edges.
Value
vector of shifts.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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