allocate_shifts_from_regimes: Allocation of shifts to edges
In pbastide/PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM
View source: R/shifts_manipulations.R
allocate_shifts_from_regimes R Documentation
Allocation of shifts to edges
Description
allocate_shifts_from_regimes returns the position of the shifts induced
by the allocation of the regimes. Only works in an "infinite site" model.
Usage
allocate_shifts_from_regimes(phylo, regimes)
Arguments
phylo
a phylogenetic tree, class phylo.
regimes
: vector of size (ntaxa + Nnode) of the regimes of each node
and tip.
Value
Vector of edges numbers where the shifts are.
pbastide/PhylogeneticEM documentation built on Feb. 12, 2024, 1:27 a.m.
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View source: R/shifts_manipulations.R
| allocate_shifts_from_regimes | R Documentation |
Allocation of shifts to edges
Description
allocate_shifts_from_regimes returns the position of the shifts induced
by the allocation of the regimes. Only works in an "infinite site" model.
Usage
allocate_shifts_from_regimes(phylo, regimes)
Arguments
phylo |
a phylogenetic tree, class |
regimes |
: vector of size (ntaxa + Nnode) of the regimes of each node and tip. |
Value
Vector of edges numbers where the shifts are.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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