htseqCount: compiles read count hits
In pcahan1/CellNet: Assess and improve cell fate engineering with network biology
htseqCount R Documentation
compiles read count hits
Description
compiles read count hits
Usage
htseqCount(df, promNames = c("rRNA", "Mt_rRNA", "protein_coding",
"__no_feature", " __ambiguous", "__too_low_aQual", "__not_aligned",
"__alignment_not_unique"))
Arguments
df
data.frame that results from htseq-count
promNames
vector of features names of interest
Value
data.frame of feature, proportion of reads mapping to this feature
pcahan1/CellNet documentation built on May 18, 2023, 4:58 p.m.
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| htseqCount | R Documentation |
compiles read count hits
Description
compiles read count hits
Usage
htseqCount(df, promNames = c("rRNA", "Mt_rRNA", "protein_coding",
"__no_feature", " __ambiguous", "__too_low_aQual", "__not_aligned",
"__alignment_not_unique"))
Arguments
df |
data.frame that results from htseq-count |
promNames |
vector of features names of interest |
Value
data.frame of feature, proportion of reads mapping to this feature
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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