sra_parse: unpacks the SRA files, splits them, and deletes SRAs
In pcahan1/CellNet: Assess and improve cell fate engineering with network biology
sra_parse R Documentation
unpacks the SRA files, splits them, and deletes SRAs
Description
unpacks the SRA files, splits them, and deletes SRAs
Usage
sra_parse(sra_ids, delete = TRUE, outdir = "/media/ephemeral0/dat",
indir = "/media/ephemeral1/dat/seq/sra")
Arguments
sra_ids
sra ids
delete
whether or not to delete the originals after fastq-dump
outdir
where to store resulting fastw files
indir
where are the sras stored by sra-toolkit
Value
nothing
pcahan1/CellNet documentation built on May 18, 2023, 4:58 p.m.
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| sra_parse | R Documentation |
unpacks the SRA files, splits them, and deletes SRAs
Description
unpacks the SRA files, splits them, and deletes SRAs
Usage
sra_parse(sra_ids, delete = TRUE, outdir = "/media/ephemeral0/dat",
indir = "/media/ephemeral1/dat/seq/sra")
Arguments
sra_ids |
sra ids |
delete |
whether or not to delete the originals after fastq-dump |
outdir |
where to store resulting fastw files |
indir |
where are the sras stored by sra-toolkit |
Value
nothing
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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