ccn_classAssess: Assessment of Classifier

In pcahan1/cancerCellNet: CellNet, for cancer

Assessment of Classifier

Description

Assess classifiers using validation data

Usage

ccn_classAssess(
  ct_scores,
  stVal,
  classLevels = "description2",
  dLevelSID = "sample_id",
  resolution = 0.005
)

Arguments

ct_scores	matrix of classification scores
stVal	sample table
classLevels	column name of the sample table indicating the categories to be used as ground truth to assess classifiers
dLevelSID	column name of the sample table that indicates sample id
resolution	increment of thresholds for assessing the classifier

Value

list of data frames with threshold, sens, precision

pcahan1/cancerCellNet documentation built on July 16, 2022, 12:12 a.m.