ccn_findSpecGenes: find genes that are preferentially expressed in specified...
In pcahan1/cancerCellNet: CellNet, for cancer
View source: R/grn_construction.R
ccn_findSpecGenes R Documentation
find genes that are preferentially expressed in specified samples
Description
find genes that are preferentially expressed in specified samples
Usage
ccn_findSpecGenes(
expDat,
sampTab,
holm = 1e-04,
cval = 0.4,
dLevel = "description1",
prune = FALSE
)
Arguments
expDat
expression matrix
sampTab
sample table
holm
sig threshold
cval
R thresh
dLevel
annotation level to group on
prune
boolean limit to genes exclusively detected as CT in one CT
Value
a list of something
pcahan1/cancerCellNet documentation built on July 16, 2022, 12:12 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/grn_construction.R
| ccn_findSpecGenes | R Documentation |
find genes that are preferentially expressed in specified samples
Description
find genes that are preferentially expressed in specified samples
Usage
ccn_findSpecGenes( expDat, sampTab, holm = 1e-04, cval = 0.4, dLevel = "description1", prune = FALSE )
Arguments
expDat |
expression matrix |
sampTab |
sample table |
holm |
sig threshold |
cval |
R thresh |
dLevel |
annotation level to group on |
prune |
boolean limit to genes exclusively detected as CT in one CT |
Value
a list of something
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.