ccn_rawScore: computes the raw z score for a gene as xmax-abs(zscore).
In pcahan1/cancerCellNet: CellNet, for cancer
ccn_rawScore R Documentation
computes the raw z score for a gene as xmax-abs(zscore).
Description
better values are higher.
Usage
ccn_rawScore(vect, mmean, ssd, xmax = 1000, reg_type)
Arguments
vect
a vector of gene expression values for multiple samples
mmean
mean value in training data
ssd
standard deviation in training data
reg_type
the type of regulation (up or down) for the specific subnetwork
Value
transformed (but not normalized) GRN score
pcahan1/cancerCellNet documentation built on July 16, 2022, 12:12 a.m.
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| ccn_rawScore | R Documentation |
computes the raw z score for a gene as xmax-abs(zscore).
Description
better values are higher.
Usage
ccn_rawScore(vect, mmean, ssd, xmax = 1000, reg_type)
Arguments
vect |
a vector of gene expression values for multiple samples |
mmean |
mean value in training data |
ssd |
standard deviation in training data |
reg_type |
the type of regulation (up or down) for the specific subnetwork |
Value
transformed (but not normalized) GRN score
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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