makeGeneCompareTab: Make Gene Comparison Table

In pcahan1/cancerCellNet: CellNet, for cancer

Make Gene Comparison Table

Description

To compile an expression table for comparison

Usage

makeGeneCompareTab(
  queryExpTab,
  avgGeneTab,
  querySample = NULL,
  trainingCat = NULL,
  geneSamples
)

Arguments

queryExpTab	a matrix of normalized expression query data from trans_prop
avgGeneTab	a matrix of averaged expression of training data from avgGeneCat.
querySample	a vector or string indicating the query samples
trainingCat	a vector or string indicating the categories of the training data
geneSamples	a vector or string indicating the genes of interest

Value

a matrix that combines query and training data with genes of interest for comparison

pcahan1/cancerCellNet documentation built on July 16, 2022, 12:12 a.m.