gnrAll: Find Genes in Clusters compare to other categories
In pcahan1/cancerCellNet: CellNet, for cancer
View source: R/findClassyGenes.R
gnrAll R Documentation
Find Genes in Clusters compare to other categories
Description
Find genes higher in a cluster compared to all other cells
Usage
gnrAll(expDat, cellLabels, sliceSize, coreProportion)
Arguments
expDat
a matrix of normalized gene expression taken from trans_prop
cellLabels
a vector of all the named vector of cancer categories
coreProportion
the proportion of logical cores for finding classification genes
Value
list of dataFrames containing pval, cval and holm for each gene in each cancer category
pcahan1/cancerCellNet documentation built on July 16, 2022, 12:12 a.m.
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View source: R/findClassyGenes.R
| gnrAll | R Documentation |
Find Genes in Clusters compare to other categories
Description
Find genes higher in a cluster compared to all other cells
Usage
gnrAll(expDat, cellLabels, sliceSize, coreProportion)
Arguments
expDat |
a matrix of normalized gene expression taken from |
cellLabels |
a vector of all the named vector of cancer categories |
coreProportion |
the proportion of logical cores for finding classification genes |
Value
list of dataFrames containing pval, cval and holm for each gene in each cancer category
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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