scn_netScores: GRN status
In pcahan1/singleCellNet: cell identity from single cell RNA-Seq data
Description
Usage
Arguments
Value
Description
Calculates the status of all GRNs in query samples as compared to training data for
Usage
1
2
scn_netScores(expDat, genes, tVals, ctt, classList = NULL,
classWeight = FALSE, exprWeight = TRUE, xmax = 1000)
Arguments
expDat
query expression matrix
tVals
tvals
classList
classList
classWeight
class weight
exprWeight
expression weight
subList
of ct => genes
minVals
minVals
Value
grn scores (not normalized)
pcahan1/singleCellNet documentation built on April 9, 2021, 8:49 a.m.
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Description Usage Arguments Value
Description
Calculates the status of all GRNs in query samples as compared to training data for
Usage
1 2 | scn_netScores(expDat, genes, tVals, ctt, classList = NULL,
classWeight = FALSE, exprWeight = TRUE, xmax = 1000)
|
Arguments
expDat |
query expression matrix |
tVals |
tvals |
classList |
classList |
classWeight |
class weight |
exprWeight |
expression weight |
subList |
of ct => genes |
minVals |
minVals |
Value
grn scores (not normalized)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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