dot-sequence_comparison_stats: Internal function lists information about the alignment...
In philliplab/EpitopeMatcher: Epitope Matcher

Internal function lists information about the alignment between the epitope and the query sequence.

.sequence_comparison_stats(
  sequence_substr_name,
  pair_alignment,
  start_pos,
  end_pos,
  range_expansion,
  candidate_substr
)

`sequence_substr_name`	The name of the sequence in the query alignment that the substring that was compared to the epitope came from.
`pair_alignment`	The pairwise alignment between the epitope and the substring from the query sequence.
`start_pos`	The starting position where the epitope was found in the reference sequence.
`end_pos`	The end position where the epitope was found in the reference sequence.
`range_expansion`	After the epitope is found in the reference seqeuence, search in each of the query sequences for the same epitope, but expand the range with this number of amino acids
`candidate_substr`	The candidate substring that was obtained by expanding the coordinates found in the reference sequence by 'range_expansion' AAs on each side (unless at the end or beginning of the sequence)