read_query_alignment: Reads in the query alignment
In philliplab/EpitopeMatcher: Epitope Matcher
Description
Usage
Arguments
Details
Description
This function currently just calls readAAStringSet in the Biostrings
package. See that function for more details.
Usage
1
read_query_alignment(file_name)
Arguments
file_name
Name of the fasta file
Details
Must be a valid FASTA file.
The FASTA headers must be in some delimited form with a special character
used for delimiting different fields. Further more, the patient id must
always be in the same column in the FASTA header. For example:
PATID_TIME_PID_CONSENSUSDETAILS
philliplab/EpitopeMatcher documentation built on Nov. 17, 2020, 3:28 p.m.
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Description Usage Arguments Details
Description
This function currently just calls readAAStringSet in the Biostrings package. See that function for more details.
Usage
1 | read_query_alignment(file_name)
|
Arguments
file_name |
Name of the fasta file |
Details
Must be a valid FASTA file.
The FASTA headers must be in some delimited form with a special character used for delimiting different fields. Further more, the patient id must always be in the same column in the FASTA header. For example: PATID_TIME_PID_CONSENSUSDETAILS
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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