Man pages for plger/iPSCpoweR
iPSCpoweR: transcriptomics-based evaluation of experimental designs for iPSC disease modeling
| aggByClone | aggByClone |
| auc | auc |
| cellpheno.permutateIndividuals | cellpheno.permutateIndividuals |
| cellphenoVarianceExplained | cellphenoVarianceExplained |
| combinePermResults | combinePermResults |
| DEA.permutateClones | DEA.permutateClones |
| DEA.permutateIndividuals | DEA.permutateIndividuals |
| dreamWrapper | dreamWrapper |
| edgeRwrapper | edgeRwrapper |
| fpkm | Convert counts to FPKM values |
| fpkm2tpm | Convert FPKM values to TPM values |
| getAOVresiduals | getAOVresiduals |
| getGeneExpr | getGeneExpr |
| getLmeResiduals | getLmeResiduals |
| getPermROC | getPermROC |
| getRecurrentGenes | getRecurrentGenes |
| getSamplesInfo | getSamplesInfo |
| getSensitivityMatrices | getSensitivityMatrices |
| getSensitivityMatrix | getSensitivityMatrix |
| getSpuriousFCs | getSpuriousFCs |
| getTxExpr | getTxExpr |
| glmmWrapper | glmmWrapper |
| initPar | initPar |
| multiProbSpurious | multiProbSpurious |
| plotPrecisionScatter | plotPrecisionScatter |
| probSpurious | probSpurious |
| readPermResults | readPermResults |
| TMM | TMM |
| transcriptionalVarianceExplained | transcriptionalVarianceExplained |
| voomLmerWrapper | voomLmerWrapper |
| voomWrapper | voomWrapper |
| voomWrapperSumReps | voomWrapperSumReps |
| vstLmerWrapper | vstLmerWrapper |
