getSpuriousFCs: getSpuriousFCs
In plger/iPSCpoweR: iPSCpoweR: transcriptomics-based evaluation of experimental designs for iPSC disease modeling
Description
Usage
Arguments
Value
View source: R/DEA.permutations.R
Description
Returns the log2(foldchange) of all spurious DEGs in results of permutations analyses.
Usage
1
getSpuriousFCs(permResults, pthreshold = 0.05)
Arguments
permResults
Either the results of the 'DEA.permutateIndividuals' or 'DEA.permutateClones' function, or a character vector of the files in which the output of these functions was saved.
pthreshold
The p-value threshold above which to consider a gene differentially-expressed.
Value
A vector of log2 foldchanges.
plger/iPSCpoweR documentation built on Feb. 2, 2022, 1:37 a.m.
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Description Usage Arguments Value
View source: R/DEA.permutations.R
Description
Returns the log2(foldchange) of all spurious DEGs in results of permutations analyses.
Usage
1 | getSpuriousFCs(permResults, pthreshold = 0.05)
|
Arguments
permResults |
Either the results of the 'DEA.permutateIndividuals' or 'DEA.permutateClones' function, or a character vector of the files in which the output of these functions was saved. |
pthreshold |
The p-value threshold above which to consider a gene differentially-expressed. |
Value
A vector of log2 foldchanges.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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