PanomiR is a package to detect miRNAs that target groups of pathways from gene expression data. This package provides functionality for generating pathway activity profiles, determining differentially activated pathways between user-specified conditions, determining clusters of pathways via the PCxN package, and generating miRNAs targeting clusters of pathways. These function can be used separately or sequentially to analyze RNA-Seq data.
|Bioconductor views||GeneExpression GeneSetEnrichment GeneTarget Pathways miRNA|
|License||MIT + file LICENSE|
|Package repository||View on GitHub|
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