snapToSeurat: Convert a snap object to a seurat object
In r3fang/SnapATAC: Single Nucleus Analysis Package for ATAC-Seq
snapToSeurat R Documentation
Convert a snap object to a seurat object
Description
Convert a snap object to a seurat object
Usage
snapToSeurat(obj, eigs.dims = 1:20, norm = TRUE, scale = TRUE)
Arguments
obj
A snap object.
eigs.dims
A vector of the dimensions to use.
norm
A logical variable indicates whether to normalize the cell by gene matrix.
scale
A logical variable indicagtes whether to scale the cell by gene matrix.
Value
Return a seurat object that contains single cell ATAC-seq data
r3fang/SnapATAC documentation built on March 29, 2022, 4:33 p.m.
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| snapToSeurat | R Documentation |
Convert a snap object to a seurat object
Description
Convert a snap object to a seurat object
Usage
snapToSeurat(obj, eigs.dims = 1:20, norm = TRUE, scale = TRUE)
Arguments
obj |
A snap object. |
eigs.dims |
A vector of the dimensions to use. |
norm |
A logical variable indicates whether to normalize the cell by gene matrix. |
scale |
A logical variable indicagtes whether to scale the cell by gene matrix. |
Value
Return a seurat object that contains single cell ATAC-seq data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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