run.magic: Run UMAP on PCA data

In rezakj/scSeqR: scSeqR; a toolkit to analyze single cell sequencing data types (i.e scRNA-seq) and large numeric matrix files.

Run UMAP on PCA data

Description

This function takes an object of class scSeqR and runs UMAP on PCA data.

Usage

run.magic(x = NULL)

Arguments

x	An object of class scSeqR.
dims	PC dimentions to be used for UMAP analysis.

Value

An object of class scSeqR.

Examples

## Not run: 
my.obj <- run.umap(my.obj, dims = 1:10)

## End(Not run)

rezakj/scSeqR documentation built on March 28, 2022, 12:17 p.m.