graph_interaction: Interaction data frame from igraph graph object

In saezlab/OmnipathR: OmniPath web service client and more

Interaction data frame from igraph graph object

Description

Convert an igraph graph object to interaction data frame. This is the reverse of the operation done by thje interaction_graph function. Networks can be easily converted to igraph objects, then you can make use of all igaph methods, and at the end, get back the interactions in a data frame, along with all new edge and node attributes.

Usage

graph_interaction(graph, implode = FALSE)

Arguments

graph	An igraph graph object created formerly from an OmniPath interactions data frame.
implode	Logical: restore the original state of the list type columns by imploding them to character vectors, subitems separated by semicolons.

Value

An interaction data frame.

See Also

interaction_graph

saezlab/OmnipathR documentation built on Nov. 10, 2024, 11:02 p.m.