homologene_organisms: Organisms in NCBI HomoloGene
In saezlab/OmnipathR: OmniPath web service client and more
homologene_organisms R Documentation
Organisms in NCBI HomoloGene
Description
Organisms in NCBI HomoloGene
Usage
homologene_organisms(name_type = "ncbi")
Arguments
name_type
Character: type of the returned name or identifier.
Many synonyms are accepted, the shortest ones: "latin", "ncbi",
"common", "ensembl". Case unsensitive.
Details
Not all NCBI Taxonomy IDs can be translated to common or
latin names. It means some organisms will be missing if translated
to those name types. In the future we will address this issue, until
then if you want to see all organisms use NCBI Taxonomy IDs.
Value
A character vector of organism names.
saezlab/OmnipathR documentation built on Nov. 10, 2024, 11:02 p.m.
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| homologene_organisms | R Documentation |
Organisms in NCBI HomoloGene
Description
Organisms in NCBI HomoloGene
Usage
homologene_organisms(name_type = "ncbi")
Arguments
name_type |
Character: type of the returned name or identifier. Many synonyms are accepted, the shortest ones: "latin", "ncbi", "common", "ensembl". Case unsensitive. |
Details
Not all NCBI Taxonomy IDs can be translated to common or latin names. It means some organisms will be missing if translated to those name types. In the future we will address this issue, until then if you want to see all organisms use NCBI Taxonomy IDs.
Value
A character vector of organism names.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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