kegg_query: Compile a query for the KEGG REST API

In saezlab/OmnipathR: OmniPath web service client and more

Compile a query for the KEGG REST API

Description

Compile a query for the KEGG REST API

Usage

kegg_query(operation, ...)

Arguments

operation	Character: one of the KEGG REST API operations.
...	Arguments for the API operation, as defined in the templates available by kegg_api_templates and in the page https://www.kegg.jp/kegg/rest/keggapi.html.

Value

A list with the following elements:

• operation - The KEGG API operation.

• names - The names of the arguments.

• query - The values of the arguments.

• error - Error messages.

• complete - Whether the query has all mandatory arguments.

Raises an error if fails to successfully compile a valid query.

Examples

kegg_query("conv", "compound", "pubchem")

saezlab/OmnipathR documentation built on June 10, 2025, 6:05 a.m.