nichenet_workarounds: Workarounds using NicheNet without attaching the package

In saezlab/OmnipathR: OmniPath web service client and more

Workarounds using NicheNet without attaching the package

Description

NicheNet requires the availability of some lazy loaded external data which are not available if the package is not loaded and attached. Also, the BBmisc::convertToShortString used for error reporting in mlrMBO::evalTargetFun.OptState is patched here to print longer error messages. Maybe it's a better solution to attach nichenetr before running the NicheNet pipeline. Alternatively you can try to call this function in the beginning. Why we don't call this automatically is just because we don't want to load datasets from another package without the user knowing about it.

Usage

nichenet_workarounds()

Value

Returns NULL.

Examples

## Not run: 
nichenet_workarounds()

## End(Not run)

saezlab/OmnipathR documentation built on Nov. 10, 2024, 11:02 p.m.