omnipath_cache_download_ready: Sets the download status to ready for a cache item

In saezlab/OmnipathR: OmniPath web service client and more

Sets the download status to ready for a cache item

Description

Sets the download status to ready for a cache item

Usage

omnipath_cache_download_ready(version, key = NULL)

Arguments

version	Version of the cache item. If does not exist a new version item will be created
key	Key of the cache item

Value

Character: invisibly returns the version number of the cache version item.

Examples

bioc_url <- 'https://bioconductor.org/'
# request a new version item (or retrieve the latest)
new_version <- omnipath_cache_latest_or_new(url = bioc_url)
# check if the version item is not a finished download
new_version$status
# [1] "unknown"
# download the file
httr::GET(bioc_url, httr::write_disk(new_version$path, overwrite = TRUE))
# report to the cache database that the download is ready
omnipath_cache_download_ready(new_version)
# now the status is ready:
version <- omnipath_cache_latest_or_new(url = bioc_url)
version$status
# "ready"
version$dl_finished
# [1] "2021-03-09 16:48:38 CET"
omnipath_cache_remove(url = bioc_url) # cleaning up

saezlab/OmnipathR documentation built on May 3, 2024, 5:32 a.m.