print_path_es: Prints network paths in an edge sequence

In saezlab/OmnipathR: OmniPath web service client and more

Prints network paths in an edge sequence

Description

Pretty prints the interactions in a path.

Usage

print_path_es(edges, G)

Arguments

edges	An igraph edge sequence object.
G	igraph object (from ptms or any interaction dataset)

Value

Returns 'NULL'.

See Also

• print_path_vs

Examples

interactions <- omnipath(resources = "SignaLink3")
OPI_g <- interaction_graph(interactions = interactions)
print_path_es(
    suppressWarnings(igraph::shortest_paths(
        OPI_g,
        from = 'TYRO3',
        to = 'STAT3',
        output = 'epath'
    ))$epath[[1]],
    OPI_g
)

saezlab/OmnipathR documentation built on Nov. 10, 2024, 11:02 p.m.