unique_intercell_network: Unique intercellular interactions

In saezlab/OmnipathR: OmniPath web service client and more

Unique intercellular interactions

Description

In the intercellular network data frames produced by import_intercell_network, by default each pair of annotations for an interaction is represented in a separate row. This function drops the annotations and keeps only the distinct interacting pairs.

Usage

unique_intercell_network(network, ...)

Arguments

network	An intercellular network data frame as produced by import_intercell_network.
...	Additional columns to keep. Note: if these have multiple values for an interacting pair, only the first row will be preserved.

Value

A data frame with interacting pairs and interaction attributes.

See Also

• import_intercell_network

• simplify_intercell_network

• filter_intercell_network

Examples

icn <- import_intercell_network()
icn_unique <- unique_intercell_network(icn)

saezlab/OmnipathR documentation built on May 3, 2024, 5:32 a.m.