PlotInternalDistance: Plots the internal distances

Description Usage Arguments Value

View source: R/distance.R

Description

Creates a bar plot of internal distances.

Usage

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PlotInternalDistance(seurat_object, group = NULL, split_by = NULL,
  method = "linkage", error_bars = "sd", rotate_x = 90)

Arguments

seurat_object

A seurat object

group

Seurat Categories or groups for which the distances between are calculated. Cell wise data.

split_by

Second seurat category to split the calculations over.

method

Cluster Distance methods to use. Options are "single", "complete", "average", "centroid", "ward", "mahalanobis". Further explanation for these methods is given in the details.

Value

Bar bar plot of distances


sbrn3/disscat documentation built on Dec. 12, 2019, 7:54 a.m.