PlotTotalDistance: Plots the total distance between two factors of a group as a...

In sbrn3/disscat: Calculates Distances Between Single Cell RNA Seq Categories

Description

Plots the total distance data on a density plot. This should visualise the distance between the two groups as well as their distributions.

Usage

PlotTotalDistance(seurat_object, group, group_start, group_destination,
  split_by = NULL)

Arguments

seurat_object	A seurat object
group	Seurat Categories or groups for which the distances between are calculated. Cell wise data.
group_start	Factor to plot the distance from
group_destination	Factor to plot the distance to
split_by	Second seurat category to split the calculations over.

Details

Need to run TotalDistance beforehand.

Value

ggplot density plot

See Also

Other distance_plot: PlotAverageDistance, PlotDistance, PlotGroupMeans

Other total_distance: total_distance, total_linkage

sbrn3/disscat documentation built on Dec. 12, 2019, 7:54 a.m.