sdchandra/CNAclinic: A Software Suite for Shallow Sequencing Copy Number Analysis
This package provides an end-to-end pipeline for copy number aberration (CNA) analysis of shallow coverage whole-genome sequencing (sWGS) data (< 0.5X).
Getting started
Browse package contents
Package details |
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| Author | Dineika Chandrananda |
| Bioconductor views | Annotation CopyNumberVariation DNASeq Genetics GenomeAnnotation Preprocessing QualityControl Sequencing |
| Maintainer | <dineika.chandrananda@cruk.cam.ac.uk> |
| License | GPL |
| Version | 1.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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