Files in selcenari/ceRNAnetsim
Regulation Simulator of Interaction between miRNA and Competing RNAs (ceRNA)

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
NEWS
R/calc_perturbation.R R/datasets.R R/find_iteration.R R/find_node_perturbation.R R/globals.R R/priming_graph.R R/simulate.R R/simulate_vis.R R/update_how.R R/update_nodes.R R/update_variables.R R/vis_graph.R README.md
data/TCGA_E9_A1N5_mirnanormal.rda
data/TCGA_E9_A1N5_mirnatumor.rda
data/TCGA_E9_A1N5_normal.rda
data/TCGA_E9_A1N5_tumor.rda
data/huge_example.rda
data/midsamp.rda
data/midsamp_new_counts.rda
data/minsamp.rda
data/mirtarbasegene.rda
data/new_counts.rda
man/TCGA_E9_A1N5_mirnanormal.Rd man/TCGA_E9_A1N5_mirnatumor.Rd man/TCGA_E9_A1N5_normal.Rd man/TCGA_E9_A1N5_tumor.Rd man/calc_perturbation.Rd man/find_iteration.Rd man/find_node_perturbation.Rd man/gene_knockdown.Rd man/huge_example.Rd man/midsamp.Rd man/midsamp_new_counts.Rd man/minsamp.Rd man/mirtarbasegene.Rd man/new_counts.Rd man/normalize.Rd man/prepare_rhs.Rd man/prepare_rhs_once.Rd man/priming_graph.Rd man/simulate.Rd man/simulate_vis.Rd man/update_how.Rd man/update_nodes.Rd man/update_variables.Rd man/vis_graph.Rd tests/testthat.R tests/testthat/test-data_convertion.R tests/testthat/test-iter_perturb.R tests/testthat/test-updating_variables.R
vignettes/.gitignore
vignettes/auxiliary_commands.Rmd vignettes/basic_usage.Rmd vignettes/convenient_iteration.Rmd
vignettes/gifs/Minsamp_Graph_After_Each_Iteration.png
vignettes/gifs/con_iter_chunk3.gif
vignettes/gifs/con_iter_chunk4.gif
vignettes/gifs/con_iter_chunk7.gif
vignettes/gifs/con_iter_chunk8.gif
vignettes/gifs/model_vignette.png
vignettes/gifs/realexample.gif
vignettes/gifs/small_sample.gif
vignettes/gifs/small_sample_chunk10.png
vignettes/mirtarbase_example.Rmd
vignettes/ref.bib
selcenari/ceRNAnetsim documentation built on Nov. 27, 2020, 1:27 a.m.