huge_example: huge example

Description Format Source

Description

A sample dataset which is utilised through integration of TCGA_E9_A1N5_normal, TCGA_E9_A1N5_mirnanormal and high-throughput experimental miRNA:gene dataset.

Format

A data frame with 7 variables and 26176 observation:

competing

name of gene

miRNA

name of miRNA

competing_counts

Expression values of competing element (gene)

mirnaexpression_normal

Expression value of miRNA elements in normal tissue

Energy

Energy of miRNA:target binding

region_effect

Coefficient for efficiency of location on target

seed_type_effect

Coefficient for efficiency of seed sequence of miRNA:target interaction

Source

Dataset was integrated by us.


selcenari/ceRNAnetsim documentation built on Nov. 27, 2020, 1:27 a.m.