TCGA_E9_A1N5_mirnatumor: TCGA_E9_A1N5_mirnatumor
In selcenari/ceRNAnetsim: Regulation Simulator of Interaction between miRNA and Competing RNAs (ceRNA)
TCGA_E9_A1N5_mirnatumor R Documentation
TCGA_E9_A1N5_mirnatumor
Description
The dataset contains mirna expression values for tumor tissue sample of TCGA-E9-A1N5 barcoded patient
Format
Classes tbl_df, tbl and data.frame with 648 observation of 6 variables:
- barcode
Sample, tumor tissue, barcode of patient based on TCGA
- mirbase_ID
mirbase id of miRNA
- miRNA
miRNA name
- Precusor
Precusor id of miRNA which is given in miRNA variable
- total_read
total reading count of miRNA which is produced from different gene locations
- total_RPM
total RPM (reading per million) of miRNA
Source
selcenari/ceRNAnetsim documentation built on Feb. 14, 2024, 4:20 a.m.
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| TCGA_E9_A1N5_mirnatumor | R Documentation |
TCGA_E9_A1N5_mirnatumor
Description
The dataset contains mirna expression values for tumor tissue sample of TCGA-E9-A1N5 barcoded patient
Format
Classes tbl_df, tbl and data.frame with 648 observation of 6 variables:
- barcode
Sample, tumor tissue, barcode of patient based on TCGA
- mirbase_ID
mirbase id of miRNA
- miRNA
miRNA name
- Precusor
Precusor id of miRNA which is given in miRNA variable
- total_read
total reading count of miRNA which is produced from different gene locations
- total_RPM
total RPM (reading per million) of miRNA
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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