update_nodes: Carries variables from edge to node.

In selcenari/ceRNAnetsim: Regulation Simulator of Interaction between miRNA and Competing RNAs (ceRNA)

Carries variables from edge to node.

Description

This function carries variables from edge to node and should be used after 'update_how' or 'update_variables' functions

Usage

update_nodes(input_graph, once = FALSE, limit = 0)

Arguments

input_graph	Processed graph object in previous step.
once	The argument is about when the carrying process runs (internal use only)
limit	absolute minimum amount of change required to be considered as up/down regulated element

Details

If the carrying process performs after priming_graph function, the argument must be TRUE. The function helps to visualisation of processed graph object, especially that includes too many nodes.This step makes it easily to follow the processes.

Value

the graph object.

Examples

data('minsamp')

minsamp %>%
  priming_graph(Competing_expression, miRNA_expression) %>%
  update_how('Gene2',2)

selcenari/ceRNAnetsim documentation built on Feb. 14, 2024, 4:20 a.m.