GEO_getElist: getElist
In shijianasdf/BasicBioinformaticsAnalysisFromZhongShan: Launch Usual Clinical tool for Kind Yield

Description Usage Author(s)

getElist()通过给定GSE号，自动下载标准格式的soft文件，提取其中的矩阵、注释和target信息，最后形成eset类列表。此函数依赖于GEOquery，可以获得详尽的表型、注释、处理流程内容，十分强大。不过，如果是外地下载soft文件，应该改为GSEXXXXX.soft.gz的名称才能正确识别。如果想保存eset文件为rda，可以选择savefile = T。如果有个性化GSE.soft文件保存空间，可以自定义gse.space属性。

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  getElist(gse.names,
         gse.space=NULL,
         savefile = F)

Weibin Huang

shijianasdf/BasicBioinformaticsAnalysisFromZhongShan documentation built on Jan. 3, 2020, 10:08 p.m.

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