GetMEs: Get new module eigengenes matrix from a given dataset

In shijianasdf/BasicBioinformaticsAnalysisFromZhongShan: Launch Usual Clinical tool for Kind Yield

Description

Get New module eigengenes matrix from a given dataset

Usage

GetMEs(object, valid.matrix, log.convert = T)

Arguments

object	the result of FastWGCNA
valid.matrix	a list of expression matrix with genes rows and sample cols.
log.convert	whether to do log scale for expression matrix

Details

Only support wgcna object with 1 Block.

Value

LuckyWGCNA Object

Author(s)

Weibin Huang<[e-mail]>

See Also

FastWGCNA.

Examples

library(lucky)
expr.matrix = rna.fpkm.tumor
design = rna.design.tumor
log.convert =T
newge <- GetMEs(object,expr.matrix)
View(newge$Data$MEs)

shijianasdf/BasicBioinformaticsAnalysisFromZhongShan documentation built on Jan. 3, 2020, 10:08 p.m.