Description Usage Arguments Value Author(s) Examples
View source: R/Anno_SeqmanAfter.R
In chip annotation,after Seqman process,there is a file with patterns like "match_probe",and SeqmanAfter() help to extra information from it.
1 2 | SeqmanAfter(path.match.probe, information.col = "trans_id",
save.file = T, names = "test1")
|
path.match.probe |
the match_probe file created by Seqman software from Sangerbox. |
information.col |
annotation information colname |
save.file |
whether save results as rda |
names |
part of saved file name. |
a data frame containing chip annotation information.
Weibin Huang<654751191@qq.com>
1 2 3 4 5 6 | path.match.probe <- "E:/RCloud/database/DataDownload/GEOqueryDownload/GSE17154/GPL6699_match_probe.txt"
information.col="trans_id"
SeqmanAfter(path.match.probe,
information.col,
save.file=T,
names ="GPL6699")
|
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