barplot_internal: Bar plot for dataframe

In sqjin/CellChat: Inference and analysis of cell-cell communication from single-cell and spatial transcriptomics data

Bar plot for dataframe

Description

Bar plot for dataframe

Usage

barplot_internal(
  df,
  x = "cellType",
  y = "value",
  fill = "condition",
  legend.title = NULL,
  width = 0.6,
  title.name = NULL,
  xlabel = NULL,
  ylabel = NULL,
  color.use = NULL,
  remove.xtick = FALSE,
  stat.add = FALSE,
  stat.method = "wilcox.test",
  percent.y = FALSE,
  label.x = 1.5,
  show.legend = TRUE,
  x.lab.rot = FALSE,
  size.text = 10
)

Arguments

df	a dataframe
x	Name of one column to show on the x-axis
y	Name of one column to show on the y-axis
fill	Name of one column to compare the values
legend.title	Name of legend
width	bar width
title.name	Name of the main title
xlabel	Name of x label
ylabel	Name of y label
color.use	defining the color of bar plot;
remove.xtick	whether remove x tick
stat.add	whether adding statistical test
stat.method, label.x	parameters for ggpubr::stat_compare_means
percent.y	whether showing y-values as percentage
show.legend	Whether show the legend
x.lab.rot	Whether rorate the xtick labels
size.text	font size

Value

ggplot2 object

sqjin/CellChat documentation built on Nov. 10, 2023, 4:29 a.m.