computeExpr_LR: Compute the expression of ligands or receptors using...
In sqjin/CellChat: Inference and analysis of cell-cell communication from single-cell and spatial transcriptomics data
computeExpr_LR R Documentation
Compute the expression of ligands or receptors using geometric mean
Description
Compute the expression of ligands or receptors using geometric mean
Usage
computeExpr_LR(geneLR, data.use, complex_input)
Arguments
geneLR
a char vector giving a set of ligands or receptors
data.use
data matrix (row are genes and columns are cells or cell groups)
complex_input
the complex_input from CellChatDB
sqjin/CellChat documentation built on Nov. 10, 2023, 4:29 a.m.
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| computeExpr_LR | R Documentation |
Compute the expression of ligands or receptors using geometric mean
Description
Compute the expression of ligands or receptors using geometric mean
Usage
computeExpr_LR(geneLR, data.use, complex_input)
Arguments
geneLR |
a char vector giving a set of ligands or receptors |
data.use |
data matrix (row are genes and columns are cells or cell groups) |
complex_input |
the complex_input from CellChatDB |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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