computeExpr_coreceptor: Modeling the effect of coreceptor on the ligand-receptor...
In sqjin/CellChat: Inference and analysis of cell-cell communication from single-cell and spatial transcriptomics data
computeExpr_coreceptor R Documentation
Modeling the effect of coreceptor on the ligand-receptor interaction
Description
Modeling the effect of coreceptor on the ligand-receptor interaction
Usage
computeExpr_coreceptor(cofactor_input, data.use, pairLRsig, type = c("A", "I"))
Arguments
cofactor_input
the cofactor_input from CellChatDB
data.use
data matrix
pairLRsig
a data frame giving ligand-receptor interactions
type
when type == "A", computing expression of co-activation receptor; when type == "I", computing expression of co-inhibition receptor.
sqjin/CellChat documentation built on Nov. 10, 2023, 4:29 a.m.
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| computeExpr_coreceptor | R Documentation |
Modeling the effect of coreceptor on the ligand-receptor interaction
Description
Modeling the effect of coreceptor on the ligand-receptor interaction
Usage
computeExpr_coreceptor(cofactor_input, data.use, pairLRsig, type = c("A", "I"))
Arguments
cofactor_input |
the cofactor_input from CellChatDB |
data.use |
data matrix |
pairLRsig |
a data frame giving ligand-receptor interactions |
type |
when type == "A", computing expression of co-activation receptor; when type == "I", computing expression of co-inhibition receptor. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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