computeExpr_agonist: Modeling the effect of agonist on the ligand-receptor...
In sqjin/CellChat: Inference and analysis of cell-cell communication from single-cell and spatial transcriptomics data
computeExpr_agonist R Documentation
Modeling the effect of agonist on the ligand-receptor interaction
Description
Modeling the effect of agonist on the ligand-receptor interaction
Usage
computeExpr_agonist(data.use, pairLRsig, cofactor_input, index.agonist, Kh, n)
Arguments
data.use
data matrix
pairLRsig
the L-R interactions
cofactor_input
the cofactor_input from CellChatDB
index.agonist
the index of agonist in the database
Kh
a parameter in Hill function
n
Hill coefficient
sqjin/CellChat documentation built on Nov. 10, 2023, 4:29 a.m.
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| computeExpr_agonist | R Documentation |
Modeling the effect of agonist on the ligand-receptor interaction
Description
Modeling the effect of agonist on the ligand-receptor interaction
Usage
computeExpr_agonist(data.use, pairLRsig, cofactor_input, index.agonist, Kh, n)
Arguments
data.use |
data matrix |
pairLRsig |
the L-R interactions |
cofactor_input |
the cofactor_input from CellChatDB |
index.agonist |
the index of agonist in the database |
Kh |
a parameter in Hill function |
n |
Hill coefficient |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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