dot-createMockSRA: ————- ===*==== Suggested names: createMockSRA...

In ss-lab-cancerunit/SpiderSeqR: A Tool for Integration of Big Bio Data

Description

Course of action - fetch the tables from the environment - set up the database connection into the relevant file (?path) - write the tables into the database - close the connection - make sure that the directory is changed back to original

Usage

.createMockSRA(path)

Arguments

path	A character with the path to the directory for the database file

Details

Options: - everything in one function per DB - split into db specific part and writing dfs into the database

.createDBFile - df - name - database file name - path to database file name

- path to file - (file known) - (tables known)

Create a mock SRA database file (for use in testing)

Value

Nothing. Creates the database file (unless already present) and writes relevant tables.

ss-lab-cancerunit/SpiderSeqR documentation built on Nov. 2, 2020, 12:18 a.m.