dot-filterSRAByTermByAccessionLevel: Filter df according to query matches only within accession...
In ss-lab-cancerunit/SpiderSeqR: A Tool for Integration of Big Bio Data
Description
Usage
Arguments
Value
Description
Performs fts search on the data frame according to the query, only searching
in the columns corresponding to specified accession levels of interest
Usage
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.filterSRAByTermByAccessionLevel(
query,
df,
acc_levels = c("run", "experiment", "sample")
)
Arguments
query
Query to be passed to MATCH operator (for fts)
df
Data frame to be filtered
acc_levels
Accession levels to search within
(choose from: run, experiment, sample, study;
defaults to c("run", "experiment", "sample"))
Value
Filtered df (containing only rows matching query
within specified accession levels)
ss-lab-cancerunit/SpiderSeqR documentation built on Nov. 2, 2020, 12:18 a.m.
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Description Usage Arguments Value
Description
Performs fts search on the data frame according to the query, only searching in the columns corresponding to specified accession levels of interest
Usage
1 2 3 4 5 | .filterSRAByTermByAccessionLevel(
query,
df,
acc_levels = c("run", "experiment", "sample")
)
|
Arguments
query |
Query to be passed to MATCH operator (for fts) |
df |
Data frame to be filtered |
acc_levels |
Accession levels to search within (choose from: run, experiment, sample, study; defaults to c("run", "experiment", "sample")) |
Value
Filtered df (containing only rows matching query within specified accession levels)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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