dot-detectMerges: Detect merges in a sample sheet
In ss-lab-cancerunit/SpiderSeqR: A Tool for Integration of Big Bio Data
Description
Usage
Arguments
Value
Description
Detect merges in a sample sheet
Usage
1
.detectMerges(df, do_nothing = FALSE)
Arguments
df
Data frame (must have experiment_accession column;
also, number of rows in df must correspond to number of SRRs)
do_nothing
Logical indicating whether,
after creating relevant columns, merge detection should be performed
(if FALSE, fills these columns with NAs)
Value
Original data frame with added columns:
n - count of SRRs within that SRx
lane - index of runs within a lane (1:n for each SRX)
mer - indication on how to merge runs
"" - no merging required
SRX... - merge runs with corresponding SRXs
ss-lab-cancerunit/SpiderSeqR documentation built on Nov. 2, 2020, 12:18 a.m.
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Description Usage Arguments Value
Description
Detect merges in a sample sheet
Usage
1 | .detectMerges(df, do_nothing = FALSE)
|
Arguments
df |
Data frame (must have experiment_accession column; also, number of rows in df must correspond to number of SRRs) |
do_nothing |
Logical indicating whether, after creating relevant columns, merge detection should be performed (if FALSE, fills these columns with NAs) |
Value
Original data frame with added columns:
n - count of SRRs within that SRx
lane - index of runs within a lane (1:n for each SRX)
mer - indication on how to merge runs
"" - no merging required
SRX... - merge runs with corresponding SRXs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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